PyDesigner

PyD is an installable Python package deisgned to perform pre- and post- processing of dMRI acquisitions.

Easy Install

PyDesigner can be installed using the PyPI package manager using the command

$ pip install PyDesigner-DWI
Note:

Remember to switch to your conda environement before parsing this command.

That’s it, you’re done!

Instructions on installing PyDesigner manually from the GitHub repository are list below.

Download

You may clone the main PyDesigner repository for the latest build, or download the build version of your choice from the Releases tab.

To clone the PyDesigner repository, in terminal, run:

$ git clone https://github.com/m-ama/PyDesigner.git

Install

PyDesigner can be automatically installed with all dependencies by opening a CLI and changing directory to root PyDesigner directory, followed by

$ pip install .
Note:

Remember to switch to your conda environement before parsing this command.

This will execute the setup.py script in root directory to automatically configure your Python environment for PyDesigner. When running the automated methods, PyDesigner can simply be called with the commad pydesigner.

Note: If you need a stable, tested and versioned build, download the most recent release from the Release tab. Click on Source code (zip) link and decompress (unzip) to any folder you desire.